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Detection and Diagnosis

Nanowires for potential biosensing applications. The scanning electron microscopy (SEM) image shows ZnO nanowires synthesized by vapor-solid process. Aligned arrays of nanowires can be used for biosensing, manipulation of cells, and converting mechanical energy into electricity for powering nanodevices.

Credit: Zhong Lin Wang, Georgia Institute of Technology

In the fight against cancer, half of the battle is won if it is diagnosed early. Identifying cancer in its early stages leads to a significantly higher 5-year survival rate. Early-stage cancer also typically requires a less aggressive treatment course. Current cancer care involves classic imaging techniques and morphologic analysis of tissues or cells. These techniques have limited capacity for achieving early diagnosis of cancer. Nanotechnology has the potential of providing new molecular contrast agents and in vitro assays to enable earlier and more accurate initial diagnosis. They can also be used for ongoing monitoring of cancer patient treatments. This is illustrated in the diagram below.

Nano-enabled biosensors (see image at right) exhibit exceptional sensitivity and specificity. They have the capacity to recognize multiple molecules, which enables them to detect extracellular cancer biomarkers like cancer-associated proteins, circulating tumor DNA, and extracellular vesicles. Nanomaterials come into play for the sensitive detection of cancer cells. For example, the isolation and characterization of circulating tumor cells (CTCs) is challenging due to their relatively low abundance. In order to more precisely detect CTCs, diverse nanomaterials are being developed and studied. Magnetic nanoparticles, nanowires, and dendrimers can be employed for this purpose. Additionally, nanoparticle probes accumulate within tumor tissues, so they can serve as contrast agents for in vivo cancer imaging, enhancing anatomical structure visualization. Nanotechnology-based approaches can also play a crucial role in measuring therapy response and optimizing treatment strategies.

Schematic illustration of nanotechnology applications in cancer detection and diagnosis. Nanotechnology-based diagnostic methods are being developed as promising tools for cancer detection that are real-time, convenient, and cost-effective. Source: Ye Zhang, Maoyu Li, Xiaomei Gao, Yongheng Chen, and Ting Liu, Journal of Hematology & Oncology, 2019.

Sensing In Vitro

The discovery of cancer-associated molecular alterations has led to new opportunities for early cancer detection. These alterations are found in the blood by employing genomic, epigenomic, transcriptomic, proteomic, and metabolomic assays. Nanotechnology-enabled liquid biopsy diagnostic devices make it possible to enrich for blood-circulating ‘cancer fingerprints’ and then perform omics analyses. Through well-established fabrication techniques, such as lithography, compact devices or point-of-care systems are crafted. These diagnostic tools use biochemical reactions to interrogate the presence, activity, or concentration of specific biological molecules in a bodily fluid sample. These reactions, such as antigen-antibody binding, hybridization of DNA fragments, or ligand adhering to cell surface epitopes, can subsequently be transformed into measurable detection signals using methods like optical, magnetic, or electronic means.

DEAL Barcode Assay to Enable Precision Medicine. The image shows the DEAL (DNA-encoded antibody library) barcode assay, a high-density test for human blood proteins. It is designed to reveal unique disease markers, allowing for a precision medicine approach to treatment.

Credit: James Heath and Leroy Hood, Institute for Systems Biology

Detection and diagnostic devices using nanoparticles have been developed for many cancers (see the table below). In a pioneering study (Jwa-min Nam, Shad Thaxton, and Chad A. Mirkin, Science, 2003), an ultrasensitive method for detecting prostate-specific antigen (PSA) was developed. It detected PSA down to 3 attomolar sensitivity level. This is six orders of magnitude more sensitive compared to clinically accepted conventional assays. This approach, known as the bio-barcode assay, employs a sandwich immunoassay design that combines magnetic nanoparticles with PSA-specific antibodies and DNA-encoded gold nanoparticles. The elevated PSA level triggers prostate-specific membrane antigen (PSMA) targeted PET imaging (Steven P. Rowe, Michael A. Gorin, and Martin G. Pomper, Annual Review of Medicine, 2019). This is useful for prostate cancer detection and therapy monitoring. Another sandwich immunoassay device has been designed, relying on DNA-encoded antibody libraries (DEAL, as shown in the right figure). The DEAL technique (Rong Fan, et al., Nature Biotechnology, 2008; Chao Ma, et al., Nature Methods, 2011) uses DNA-directed immobilization of antibodies in microfluidic channels. This can convert a pre-patterned single stranded DNA barcode microarray into an antibody microarray. This assay can be used in multiplex immunoassays, on-chip blood separation, and measurement of large protein panels directly from blood. Looking forward, new advances in the coupling of complex microfluidics and nanoscale materials offer many benefits. They have the potential to gain comprehensive in vitro cancer diagnostic insights from a patient sample. 

Examples of nanomaterial detection platforms used in cancer liquid biopsy studies. EpCAM, epithelial cell adhesion molecule. Adapted from Lois Gardner, Kostas Kostarelos, Parag Mallick, Caroline Dive, and Marilena Hadjidemetriou, Nature Reviews Clinical Oncology, 2022.

Proteins
Nanomaterial platform Enrichment mechanism Biofluid (volume) Type of cancer Reference
Nanotrap hydrogel core–shell nanoparticles Affinity capture Serum (0.2 ml) Ovarian or prostate cancer Fredolini, C. et al. AAPS J. 2010
PEGylated liposomal doxorubicin Protein corona Plasma (1 ml) Ovarian cancer Hadjidemetriou, M. et al. Nano Today 2020
Proteograph superparamagnetic iron oxide nanoparticles Protein corona Plasma (0.1 ml) Non-small-cell lung cancer Blume, J. E. et al. Nat. Commun. 2020
Circulating Cell- Free DNA (cfDNA)
Nanomaterial platform Enrichment mechanism Biofluid (volume) Type of cancer Reference
GMACS chip (silica magnetic nanoparticles) Label free Serum (0.5 ml) Breast cancer Gwak, H. et al. Biomicrofluidics 2019
Polypyrrole-coated gold nanowires Label free Plasma (0.2-1 ml) Breast or lung cancer Jeon, S. H. et al. Theranostics 2016
Circulating Tumor Cells (CTCs)
Nanomaterial platform Enrichment mechanism Biofluid (volume) Type of cancer Reference
Magnetic nanowires Immunocapture (anti-pCAM, anti-EGFR, anti-N-cadherin, anti-TROP2 and anti-vimentin) Blood (0.2-1 ml) Non-metastatic, early-stage breast cancer Hong, W. et al. Biomaterials 2016
TiO2 nanofibers Immunocapture (anti-EpCAM) Blood (1 ml) Colorectal or gastric cancer Zhang, N. et al. Adv. Mater.2012
PL–PEG–NH2- functionalized graphene oxide nanosheets Immunocapture (anti-EpCAM) Blood (1 ml) Lung, breast, or pancreatic cancer Yoon, H. J. et al. Nat. Nanotechnol. 2013
Carbon nanotube chip Label free Blood (4-8.5 ml) Breast cancer Loeian, M. S. et al. Lab. Chip 2019
Extracellular Vesicles (EVs)
Nanomaterial platform Enrichment mechanism Biofluid (volume) Type of cancer Reference
Nano-interfaced microfluidic exosome chip (graphene oxide–polydopamine coated) Immunocapture (anti-CD81) Plasma (2 μl) Ovarian cancer Zhang, P. et al. Lab. Chip 2016
Silicon nanowires Immunocapture (anti-EpCAM, anti-ASGPR1 and anti-CD147) Plasma (0.5 ml) Hepatocellular carcinoma Sun, N. et al. Nat. Commun.2020

Imaging in Vivo

The sensitivity of current imaging methods, such as MRI, PET, and CT, can only detect cancers once thousands of cancer cells have grown. By this time, the cancer may have spread. Nanotechnology-based imaging contrast agents are being developed and translated for conventional imaging modalities. These offer the ability to specifically target and significantly amplify the detection of tumors in vivo. Current nanoscale imaging platforms enables novel imaging modalities that are not traditionally used for clinical cancer treatment and diagnosis. Examples include photoacoustic tomography (PAT), Raman spectroscopic imaging, and multimodal imaging (i.e., contrast agents designed for several imaging modalities at the same time). Nanotechnology makes these sensitive imaging platforms possible. Nanoparticles are designed to carry multiple components, such as conventional contrast agents and ligands, to target tumor cells.

NCI-funded research has produced many notable nanotechnology-based imaging agents over the past decade. For instance, researchers have engineered multimodal nanoparticles that can delineate the margins of brain tumors before and during surgery (Moritz F Kircher, et al., Nature Methods, 2012). These nanoparticles, used in combination of MRI, PAT, and Raman detection, are capable of tracking tumor growth and surgical staging via MRI. These agents also enable the surgeon to visualize a brain tumor down to the single cancer cell level, increasing the potential to precisely remove cancerous tissue (see the figure below). Similarly, scientists have designed silica-hybrid nanoparticles (‘C-dots’). These nanoparticles can be used as contrast agents in PET and optical imaging in the same platform (Evan Philips, et al., Science Trans Med., 2016). They have been proven to actively target metastatic melanoma with cRGDY peptides in clinical trials.

Principle of a triple-modality MRI-photoacoustic-Raman imaging nanoparticle. The nanoparticle is intravenously injected. In contrast to contemporary contrast agents that wash out of the tumor region quickly, the nanoparticles are stably internalized within the brain tumor cells. This enables the whole range of imaging studies from pre-operative MRI for surgical planning to intra-operative imaging during the surgery, all with a single injection. T1-weighted MRI depicts the outline of the tumor due to the T1-shortening effect of the gadolinium. During the surgery, photoacoustic imaging with its greater depth penetration and 3D imaging capability guides gross resection, while Raman imaging directs the resection of the microscopic tumor at the margins. In addition, Raman would be used for rapid ex vivo confirmation of clean margins in the operating room instead of the time-consuming analysis of frozen sections.

Credit: Moritz Kircher, Dana Farber Cancer Institute

Cancer nanotechnology has long been viewed as a way to simultaneously image and administer therapy in vivo. This has led to the emergence of ‘theranostic’ nanoscale platforms. A diagnostic platform for pancreatic cancer has been designed to break through the fibrotic stromal tissue of these tumors (Lei Zhu, Hui Mao, and Lily Yang, WIREs Nanomedicine and Nanobiotechnology, 2022). These nanoparticles contain magnetic iron cores. Once they are past the fibrotic barrier, they facilitate MRI contrast for diagnosis while they deliver small-molecule therapeutic drugs directly to cancer cells.

Measuring Response to Therapy

Multiplexed blood protein profiling via magneto-nano chip in vitro diagnostics. This figure shows a microfluidic magneto-nano chip with 8 by 8 sensors arrays and 8 microfluidic channels. These chips are being developed to monitor protein profiles in blood samples from cancer patients. This technology uses magnetic nanoparticles to label protein molecules.

Credit: Sebastian J. Osterfeld and Shan X. Wang, Stanford University

The cornerstone of precise and prognostic medical care lies in measuring an individual patient’s response to targeted therapy, immunotherapy, or surgery as their disease progresses. Accurate and relevant monitoring of disease progress can allow providers to optimize treatment regimens. Treatment can be optimized through therapeutic course correction, use of drug combinations, and fine-tuning drug doses. Prognostic methods are essential for preemptive clinical decision making, such as separating patients who respond to therapy from those who do not. It is also used to stratify patients for clinical trials. In vivo imaging, tissue biopsy, and in vitro diagnostics are suited to this purpose. It is important for oncologists to be able to track cancer cell death in vivo. It enables them to deliver effective dosing regimens and/or precisely administer novel therapies. For example, scientists have designed a target-enabled in situ ligand assembly (TESLA) nanoparticle system. In this system, nanoparticles can self-assemble within the body when cleaved by enzymes from therapy-induced cell death (Deju Ye, et al., Nature Chemistry, 2014). These nanoparticles also carry imaging contrast agents to monitor local tumor response to therapies.

Tissue biopsy serves as the traditional gold standard for cancer identification. However, it is invasive and has limited space sampling capability for tracking disease progression relative to the course of therapy. In vitro cancer diagnosis and monitoring is a simpler method of tracking therapy response. Over time, it analyzes biological material shed by the tumor that circulates in blood. Cells, DNA, other cancer-specific biomolecules are detectable using these methods. There are incredibly low concentrations of these biomolecules compared to other blood components. Specific and highly sensitive tools are required to detect, capture, and purify them. Nanotechnology is making these essential tools possible. For instance, microfluidic nano chips (see figure at right) have been developed for multiplex protein detection of potential cancer markers at sub-picomolar concentrations (Sebastian J. Osterfeld, et, al., PNAS, 2008). They are also used for CTC detection, with over 95% sensitivity (Millicent Lin, et al., Accounts of Chemical Research, 2014). This new technology makes it possible to effectively monitor cells and proteins in blood samples. They help us enhance care and improve therapy outcomes.

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