pCR Trial-Level Surrogate Analysis Software
This is an R source package that contains the code, data, documentation, and results of the analysis reported in "Assessing pathological complete response as a trial-level surrogate endpoint for early-stage breast cancer" and supplement, by E. L. Korn, M. C. Sachs, & L. M. McShane, Ann Oncol 27: 10-15, 2016.
The package is organized as follows:
- DESCRIPTION details the analysis and documents the dependencies.
- The /data subdirectory contains the data files in .csv and .RData formats. The data sets are documented in the /man directory.
- The /inst/doc directory contains the code and results of the analysis.
- The /R directory has the R functions that were used in the analysis.
- The /man directory contains the documentation in Rd format. View the documentation in R by typing ?pcrmeta.
Download and Install
- Download the source file:
Download pcrmeta_0.4.1.tar.gz Type this command:
install.packages("pcrmeta_0.4.1.tar.gz", type = "source", repos = NULL)
- Load the package by typing
library(pcrmeta)
- View the help files by typing
?pcrmeta